Retrieve Drug Molecules in SMILES Format from the DrugBank Database
Usage
getSmiFromDrugBank(id, parallel = 5)
Arguments
- id
A character vector, as the DrugBank drug ID.
- parallel
An integer, the parallel parameter, indicates how many
process the user would like to use for retrieving
the data (using RCurl), default is 5.
For regular cases, we recommend a number less than 20.
Value
A length of id character vector, each element containing
the corresponding drug molecule.
Details
This function retrieves drug molecules in SMILES format from the
DrugBank database.
See also
See getMolFromDrugBank for retrieving drug molecules
in MOL format from the DrugBank database.
Examples
id = 'DB00859' # Penicillamine
# \donttest{
getSmiFromDrugBank(id)# }
#> Error in loadMolecules(tmpfile): The package "rcdk" is required to load molecular structures
