TargetNet


Q9NWZ3

Interleukin-1 receptor-associated kinase 4


Function

Serine/threonine-protein kinase that plays a critical role in initiating innate immune response against foreign pathogens. Involved in Toll-like receptor (TLR) and IL-1R signaling pathways. Is rapidly recruited by MYD88 to the receptor- signaling complex upon TLR activation to form the Myddosome together with IRAK2. Phosphorylates initially IRAK1, thus stimulating the kinase activity and intensive autophosphorylation of IRAK1. Phosphorylates E3 ubiquitin ligases Pellino proteins (PELI1, PELI2 and PELI3) to promote pellino-mediated polyubiquitination of IRAK1. Then, the ubiquitin-binding domain of IKBKG/NEMO binds to polyubiquitinated IRAK1 bringing together the IRAK1-MAP3K7/TAK1-TRAF6 complex and the NEMO-IKKA-IKKB complex. In turn, MAP3K7/TAK1 activates IKKs (CHUK/IKKA and IKBKB/IKKB) leading to NF-kappa-B nuclear translocation and activation. Alternatively, phosphorylates TIRAP to promote its ubiquitination and subsequent degradation. Phosphorylates NCF1 and regulates NADPH oxidase activation after LPS stimulation suggesting a similar mechanism during microbial infections.


Database Links

Database Links
UniProt Q9NWZ3
PDB 2NRU, 2NRY, 2O8Y, 2OIB, 2OIC, 2OID, 3MOP
BioGrid 119322
BindingDB Q9NWZ3
DrugBank Not available
Guide to PHARMACOLOGY 2045
PharmGKB PA134914577
KEGG hsa:51135
BioCyc Not available
Entrez Gene (GeneID) 51135

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9036 0.0048
Accuracy 0.8417 0.0119
Sensitivity 0.8014 0.0213
Specificity 0.879 0.0134
BEDROC 0.9776 0.0091
MCC Threshold 0.536 N/A
MCC 0.7031 N/A
F-score Threshold 0.406 N/A
F-score 0.8439 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:52