TargetNet


Q9NR96

Toll-like receptor 9


Function

Key component of innate and adaptive immunity. TLRs (Toll-like receptors) control host immune response against pathogens through recognition of molecular patterns specific to microorganisms. TLR9 is a nucleotide-sensing TLR which is activated by unmethylated cytidine-phosphate-guanosine (CpG) dinucleotides. Acts via MYD88 and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response. Controls lymphocyte response to Helicobacter infection.


Database Links

Database Links
UniProt Q9NR96
PDB Not available
BioGrid 119902
BindingDB Q9NR96
DrugBank DB00608
Guide to PHARMACOLOGY Not available
PharmGKB PA38010
KEGG hsa:54106
BioCyc Not available
Entrez Gene (GeneID) 54106

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.7583 0.0128
Accuracy 0.7104 0.0109
Sensitivity 0.7427 0.0161
Specificity 0.6748 0.023
BEDROC 0.8631 0.0386
MCC Threshold 0.512 N/A
MCC 0.4149 N/A
F-score Threshold 0.468 N/A
F-score 0.736 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


Copyright © 2014 - 2017 TargetNet. Developed and maintained by Nan Xiao.

Page generated on: 2014-04-29 14:39:52