TargetNet


Q96RI1

Bile acid receptor


Function

Ligand-activated transcription factor. Receptor for bile acids such as chenodeoxycholic acid, lithocholic acid and deoxycholic acid. Represses the transcription of the cholesterol 7-alpha-hydroxylase gene (CYP7A1) through the induction of NR0B2 or FGF19 expression, via two distinct mechanisms. Activates the intestinal bile acid-binding protein (IBABP). Activates the transcription of bile salt export pump ABCB11 by directly recruiting histone methyltransferase CARM1 to this locus.


Database Links

Database Links
UniProt Q96RI1
PDB 1OSH, 1OSK, 3BEJ, 3DCT, 3DCU, 3FLI, 3FXV, 3GD2, 3HC5, 3HC6, 3L1B, 3OKH, 3OKI, 3OLF, 3OMK, 3OMM, 3OOF, 3OOK, 3P88, 3P89, 3RUT, 3RUU, 3RVF, 4II6
BioGrid 115296
BindingDB Q96RI1
DrugBank Not available
Guide to PHARMACOLOGY 603
PharmGKB PA31752
KEGG hsa:9971
BioCyc Not available
Entrez Gene (GeneID) 9971

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9833 9.8501 × 10-4
Accuracy 0.9554 0.0024
Sensitivity 0.9592 0.0048
Specificity 0.9511 0.0046
BEDROC 0.9973 0.0024
MCC Threshold 0.416 N/A
MCC 0.923 N/A
F-score Threshold 0.416 N/A
F-score 0.9638 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:51