TargetNet


Q92769

Histone deacetylase 2


Function

Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Forms transcriptional repressor complexes by associating with MAD, SIN3, YY1 and N-COR. Interacts in the late S-phase of DNA-replication with DNMT1 in the other transcriptional repressor complex composed of DNMT1, DMAP1, PCNA, CAF1. Deacetylates TSHZ3 and regulates its transcriptional repressor activity. Component of a RCOR/GFI/KDM1A/HDAC complex that suppresses, via histone deacetylase (HDAC) recruitment, a number of genes implicated in multilineage blood cell development.


Database Links

Database Links
UniProt Q92769
PDB 3MAX, 4LXZ, 4LY1
BioGrid 109316
BindingDB Q92769
DrugBank DB02546
Guide to PHARMACOLOGY 2616
PharmGKB PA29227
KEGG hsa:3066
BioCyc Not available
Entrez Gene (GeneID) 3066

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9321 0.0042
Accuracy 0.8715 0.0072
Sensitivity 0.8725 0.0113
Specificity 0.8706 0.0098
BEDROC 0.9565 0.0095
MCC Threshold 0.484 N/A
MCC 0.7607 N/A
F-score Threshold 0.484 N/A
F-score 0.8746 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


Copyright © 2014 - 2017 TargetNet. Developed and maintained by Nan Xiao.

Page generated on: 2014-04-29 14:39:51