TargetNet


Q13133

Oxysterols receptor LXR-alpha


Function

Orphan receptor. Interaction with RXR shifts RXR from its role as a silent DNA-binding partner to an active ligand- binding subunit in mediating retinoid responses through target genes defined by LXRES. LXRES are DR4-type response elements characterized by direct repeats of two similar hexanuclotide half- sites spaced by four nucleotides. Plays an important role in the regulation of cholesterol homeostasis, regulating cholesterol uptake through MYLIP-dependent ubiquitination of LDLR, VLDLR and LRP8 (By similarity).


Database Links

Database Links
UniProt Q13133
PDB 1UHL, 3IPQ, 3IPS, 3IPU
BioGrid 115373
BindingDB Q13133
DrugBank Not available
Guide to PHARMACOLOGY 602
PharmGKB PA31751
KEGG hsa:10062
BioCyc Not available
Entrez Gene (GeneID) 10062

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9679 0.0021
Accuracy 0.9174 0.0046
Sensitivity 0.9239 0.0061
Specificity 0.9111 0.0059
BEDROC 0.9931 0.002
MCC Threshold 0.52 N/A
MCC 0.8323 N/A
F-score Threshold 0.52 N/A
F-score 0.9162 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


Copyright © 2014 - 2017 TargetNet. Developed and maintained by Nan Xiao.

Page generated on: 2014-04-29 14:39:47