TargetNet


Q08881

Tyrosine-protein kinase ITK/TSK


Function

Tyrosine kinase that plays an essential role in regulation of the adaptive immune response. Regulates the development, function and differentiation of conventional T-cells and nonconventional NKT-cells. When antigen presenting cells (APC) activate T-cell receptor (TCR), a series of phosphorylation lead to the recruitment of ITK to the cell membrane, in the vicinity of the stimulated TCR receptor, where it is phosphorylated by LCK. Phosphorylation leads to ITK autophosphorylation and full activation. Once activated, phosphorylates PLCG1, leading to the activation of this lipase and subsequent cleavage of its substrates. In turn, the endoplasmic reticulum releases calcium in the cytoplasm and the nuclear activator of activated T-cells (NFAT) translocates into the nucleus to perform its transcriptional duty. Phosphorylates 2 essential adapter proteins: the linker for activation of T-cells/LAT protein and LCP2. Then, a large number of signaling molecules such as VAV1 are recruited and ultimately lead to lymphokine production, T-cell proliferation and differentiation.


Database Links

Database Links
UniProt Q08881
PDB 1SM2, 1SNU, 1SNX, 2E6I, 2LMJ, 2YUQ, 3MIY, 3MJ1, 3MJ2, 3QGW, 3QGY, 3T9T, 3V5J, 3V5L, 3V8T, 3V8W, 4HCT, 4HCU, 4HCV, 4KIO, 4L7S, 4MF0, 4MF1
BioGrid 109907
BindingDB Q08881
DrugBank Not available
Guide to PHARMACOLOGY 2046
PharmGKB PA29968
KEGG hsa:3702
BioCyc Not available
Entrez Gene (GeneID) 3702

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9526 0.0015
Accuracy 0.9066 0.0036
Sensitivity 0.895 0.004
Specificity 0.9164 0.0058
BEDROC 0.9913 0.0028
MCC Threshold 0.648 N/A
MCC 0.8151 N/A
F-score Threshold 0.594 N/A
F-score 0.8971 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:47