TargetNet


Q04609

Glutamate carboxypeptidase 2


Function

Has both folate hydrolase and N-acetylated-alpha-linked- acidic dipeptidase (NAALADase) activity. Has a preference for tri- alpha-glutamate peptides. In the intestine, required for the uptake of folate. In the brain, modulates excitatory neurotransmission through the hydrolysis of the neuropeptide, N- aceylaspartylglutamate (NAAG), thereby releasing glutamate. Isoform PSM-4 and isoform PSM-5 would appear to be physiologically irrelevant. Involved in prostate tumor progression.


Database Links

Database Links
UniProt Q04609
PDB 1Z8L, 2C6C, 2C6G, 2C6P, 2CIJ, 2JBJ, 2JBK, 2OOT, 2OR4, 2PVV, 2PVW, 2XEF, 2XEG, 2XEI, 2XEJ, 3BHX, 3BI0, 3BI1, 3BXM, 3D7D, 3D7F, 3D7G, 3D7H, 3IWW, 3RBU, 3SJE, 3SJF, 3SJG, 3SJX
BioGrid 108630
BindingDB Q04609
DrugBank DB00089, DB00142
Guide to PHARMACOLOGY 1606
PharmGKB PA28205
KEGG hsa:2346
BioCyc Not available
Entrez Gene (GeneID) 2346

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9563 0.0059
Accuracy 0.9026 0.0088
Sensitivity 0.9438 0.0125
Specificity 0.8562 0.0098
BEDROC 0.9899 0.0066
MCC Threshold 0.48 N/A
MCC 0.8392 N/A
F-score Threshold 0.48 N/A
F-score 0.9263 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:46