TargetNet


Q03181

Peroxisome proliferator-activated receptor delta


Function

Ligand-activated transcription factor. Receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Has a preference for poly-unsaturated fatty acids, such as gamma-linoleic acid and eicosapentanoic acid. Once activated by a ligand, the receptor binds to promoter elements of target genes. Regulates the peroxisomal beta-oxidation pathway of fatty acids. Functions as transcription activator for the acyl-CoA oxidase gene. Decreases expression of NPC1L1 once activated by a ligand.


Database Links

Database Links
UniProt Q03181
PDB 1GWX, 1Y0S, 2AWH, 2B50, 2BAW, 2ENV, 2GWX, 2J14, 2Q5G, 2XYJ, 2XYW, 2XYX, 2ZNP, 2ZNQ, 3D5F, 3DY6, 3ET2, 3GWX, 3GZ9, 3OZ0, 3PEQ, 3SP9, 3TKM
BioGrid 111463
BindingDB Q03181
DrugBank DB00159, DB00605, DB00374
Guide to PHARMACOLOGY 594
PharmGKB PA33557
KEGG hsa:5467
BioCyc Not available
Entrez Gene (GeneID) 5467

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9521 0.0018
Accuracy 0.9077 0.0022
Sensitivity 0.9116 0.004
Specificity 0.9043 0.0032
BEDROC 0.9488 0.0079
MCC Threshold 0.398 N/A
MCC 0.8317 N/A
F-score Threshold 0.398 N/A
F-score 0.9122 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:46