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P78536

Disintegrin and metalloproteinase domain-containing protein 17


Function

Cleaves the membrane-bound precursor of TNF-alpha to its mature soluble form. Responsible for the proteolytical release of soluble JAM3 from endothelial cells surface. Responsible for the proteolytic release of several other cell-surface proteins, including p75 TNF-receptor, interleukin 1 receptor type II, p55 TNF-receptor, transforming growth factor-alpha, L-selectin, growth hormone receptor, MUC1 and the amyloid precursor protein. Acts as an activator of Notch pathway by mediating cleavage of Notch, generating the membrane-associated intermediate fragment called Notch extracellular truncation (NEXT).


Database Links

Database Links
UniProt P78536
PDB 1BKC, 1ZXC, 2A8H, 2DDF, 2FV5, 2FV9, 2I47, 2M2F, 2OI0, 3B92, 3CKI, 3E8R, 3EDZ, 3EWJ, 3G42, 3KMC, 3KME, 3L0T, 3L0V, 3LE9, 3LEA, 3LGP, 3O64
BioGrid 112731
BindingDB P78536
DrugBank Not available
Guide to PHARMACOLOGY 1662
PharmGKB PA24512
KEGG hsa:6868
BioCyc Not available
Entrez Gene (GeneID) 6868

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9924 4.1245 × 10-4
Accuracy 0.9735 0.0015
Sensitivity 0.9816 0.0022
Specificity 0.9654 0.0017
BEDROC 0.9955 0.0024
MCC Threshold 0.434 N/A
MCC 0.9486 N/A
F-score Threshold 0.434 N/A
F-score 0.9743 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:44