TargetNet


P55211

Caspase-9


Function

Involved in the activation cascade of caspases responsible for apoptosis execution. Binding of caspase-9 to Apaf- 1 leads to activation of the protease which then cleaves and activates caspase-3. Promotes DNA damage-induced apoptosis in a ABL1/c-Abl-dependent manner. Proteolytically cleaves poly(ADP- ribose) polymerase (PARP).


Database Links

Database Links
UniProt P55211
PDB 1JXQ, 1NW9, 2AR9, 3D9T, 3V3K, 3YGS
BioGrid 107292
BindingDB P55211
DrugBank Not available
Guide to PHARMACOLOGY 1625
PharmGKB PA26094
KEGG hsa:842
BioCyc Not available
Entrez Gene (GeneID) 842

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.7752 0.009
Accuracy 0.7185 0.0109
Sensitivity 0.6353 0.0155
Specificity 0.793 0.018
BEDROC 0.9032 0.012
MCC Threshold 0.546 N/A
MCC 0.5 N/A
F-score Threshold 0.474 N/A
F-score 0.7024 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:43