TargetNet


P54760

Ephrin type-B receptor 4


Function

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Together with its cognate ligand/functional ligand EFNB2 plays a central role in heart morphogenesis and angiogenesis through regulation of cell adhesion and cell migration. EPHB4- mediated forward signaling controls cellular repulsion and segregation form EFNB2-expressing cells. Plays also a role in postnatal blood vessel remodeling, morphogenesis and permeability and is thus important in the context of tumor angiogenesis.


Database Links

Database Links
UniProt P54760
PDB 2BBA, 2E7H, 2HLE, 2QKQ, 2VWU, 2VWV, 2VWW, 2VWX, 2VWY, 2VWZ, 2VX0, 2VX1, 2X9F, 2XVD, 2YN8, 3ZEW, 4AW5, 4BB4
BioGrid 108364
BindingDB P54760
DrugBank Not available
Guide to PHARMACOLOGY 1833
PharmGKB PA27827
KEGG hsa:2050
BioCyc Not available
Entrez Gene (GeneID) 2050

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.8994 0.0036
Accuracy 0.8206 0.0072
Sensitivity 0.7991 0.0127
Specificity 0.8427 0.0086
BEDROC 0.9926 0.005
MCC Threshold 0.63 N/A
MCC 0.6819 N/A
F-score Threshold 0.394 N/A
F-score 0.8399 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:43