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P51681

C-C chemokine receptor type 5


Function

Receptor for a number of inflammatory CC-chemokines including MIP-1-alpha, MIP-1-beta and RANTES and subsequently transduces a signal by increasing the intracellular calcium ion level. May play a role in the control of granulocytic lineage proliferation or differentiation. Acts as a coreceptor (CD4 being the primary receptor) for HIV-1 R5 isolates.


Database Links

Database Links
UniProt P51681
PDB 1ND8, 1NE0, 1OPN, 1OPT, 1OPW, 2L87, 2RLL, 2RRS, 4MBS
BioGrid 107639
BindingDB P51681
DrugBank DB04835
Guide to PHARMACOLOGY 62
PharmGKB PA26170
KEGG hsa:1234
BioCyc Not available
Entrez Gene (GeneID) 1234

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9894 4.2587 × 10-4
Accuracy 0.9651 0.0015
Sensitivity 0.9643 0.0022
Specificity 0.9658 0.0021
BEDROC 0.9963 0.0017
MCC Threshold 0.506 N/A
MCC 0.9328 N/A
F-score Threshold 0.506 N/A
F-score 0.9636 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:42