Presenilin-1
Probable catalytic subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors and APP (beta-amyloid precursor protein). Requires the other members of the gamma-secretase complex to have a protease activity. May play a role in intracellular signaling and gene expression or in linking chromatin to the nuclear membrane. Stimulates cell-cell adhesion though its association with the E-cadherin/catenin complex. Under conditions of apoptosis or calcium influx, cleaves E-cadherin promoting the disassembly of the E-cadherin/catenin complex and increasing the pool of cytoplasmic beta-catenin, thus negatively regulating Wnt signaling. May also play a role in hematopoiesis.
| Database | Links |
|---|---|
| UniProt | P49768 |
| PDB | 2KR6 |
| BioGrid | 111642 |
| BindingDB | P49768 |
| DrugBank | Not available |
| Guide to PHARMACOLOGY | 2402 |
| PharmGKB | PA33855 |
| KEGG | hsa:5663 |
| BioCyc | Not available |
| Entrez Gene (GeneID) | 5663 |
| Metric | Mean Value | Standard Deviation |
|---|---|---|
| AUC | 0.9746 | 0.002 |
| Accuracy | 0.9284 | 0.0064 |
| Sensitivity | 0.9391 | 0.0078 |
| Specificity | 0.9182 | 0.0108 |
| BEDROC | 0.9844 | 0.0122 |
| MCC Threshold | 0.62 | N/A |
| MCC | 0.8851 | N/A |
| F-score Threshold | 0.588 | N/A |
| F-score | 0.9391 | N/A |