TargetNet


P48443

Retinoic acid receptor RXR-gamma


Function

Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. The RAR/RXR heterodimers bind to the retinoic acid response elements (RARE) composed of tandem 5'-AGGTCA-3' sites known as DR1-DR5. The high affinity ligand for RXRs is 9-cis retinoic acid (By similarity).


Database Links

Database Links
UniProt P48443
PDB 2GL8
BioGrid 112170
BindingDB P48443
DrugBank DB00459, DB00210, DB00523, DB00926, DB00755
Guide to PHARMACOLOGY 612
PharmGKB PA34892
KEGG hsa:6258
BioCyc Not available
Entrez Gene (GeneID) 6258

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9801 0.0024
Accuracy 0.943 0.0062
Sensitivity 0.953 0.0083
Specificity 0.9309 0.0109
BEDROC 0.9644 0.0217
MCC Threshold 0.624 N/A
MCC 0.8977 N/A
F-score Threshold 0.424 N/A
F-score 0.9532 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:41