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P42336

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform


Function

Phosphoinositide-3-kinase (PI3K) that phosphorylates PtdIns (Phosphatidylinositol), PtdIns4P (Phosphatidylinositol 4- phosphate) and PtdIns(4,5)P2 (Phosphatidylinositol 4,5- bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. Participates in cellular signaling in response to various growth factors. Involved in the activation of AKT1 upon stimulation by receptor tyrosine kinases ligands such as EGF, insulin, IGF1, VEGFA and PDGF. Involved in signaling via insulin-receptor substrate (IRS) proteins. Essential in endothelial cell migration during vascular development through VEGFA signaling, possibly by regulating RhoA activity. Required for lymphatic vasculature development, possibly by binding to RAS and by activation by EGF and FGF2, but not by PDGF. Regulates invadopodia formation in breast cancer cells through the PDPK1- AKT1 pathway. Participates in cardiomyogenesis in embryonic stem cells through a AKT1 pathway. Participates in vasculogenesis in embryonic stem cells through PDK1 and protein kinase C pathway. Has also serine-protein kinase activity: phosphorylates PIK3R1 (p85alpha regulatory subunit), EIF4EBP1 and HRAS.


Database Links

Database Links
UniProt P42336
PDB 2ENQ, 2RD0, 3HHM, 3HIZ, 3ZIM, 4L1B, 4L23, 4L2Y
BioGrid 111308
BindingDB P42336
DrugBank Not available
Guide to PHARMACOLOGY 2153
PharmGKB PA33308
KEGG hsa:5290
BioCyc MetaCyc:HS04527-MONOMER
Entrez Gene (GeneID) 5290

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9807 5.8181 × 10-4
Accuracy 0.9376 0.002
Sensitivity 0.9324 0.0037
Specificity 0.9421 0.0019
BEDROC 0.9918 0.002
MCC Threshold 0.498 N/A
MCC 0.8783 N/A
F-score Threshold 0.428 N/A
F-score 0.9348 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:38