TargetNet


P42262

Glutamate receptor 2


Function

Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L- glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. In the presence of CACNG4 or CACNG7 or CACNG8, shows resensitization which is characterized by a delayed accumulation of current flux upon continued application of glutamate.


Database Links

Database Links
UniProt P42262
PDB 2WJW, 2WJX, 2XHD, 3R7X, 3RN8, 3RNN, 3UA8
BioGrid 109148
BindingDB P42262
DrugBank DB00142
Guide to PHARMACOLOGY 445
PharmGKB PA28967
KEGG hsa:2891
BioCyc Not available
Entrez Gene (GeneID) 2891

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9467 0.0065
Accuracy 0.8939 0.013
Sensitivity 0.875 0.024
Specificity 0.9107 0.0155
BEDROC 0.9896 0.0142
MCC Threshold 0.544 N/A
MCC 0.8254 N/A
F-score Threshold 0.544 N/A
F-score 0.9048 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


Copyright © 2014 - 2017 TargetNet. Developed and maintained by Nan Xiao.

Page generated on: 2014-04-29 14:39:38