TargetNet


P35439

Glutamate receptor ionotropic, NMDA 1


Function

NMDA receptor subtype of glutamate-gated ion channels possesses high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. Plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors.


Database Links

Database Links
UniProt P35439
PDB 1PB7, 1PB8, 1PB9, 1PBQ, 1Y1M, 1Y1Z, 1Y20, 2A5T, 3Q41, 4KCC, 4KFQ
BioGrid 246573
BindingDB P35439
DrugBank Not available
Guide to PHARMACOLOGY Not available
PharmGKB Not available
KEGG rno:24408
BioCyc Not available
Entrez Gene (GeneID) 24408

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9098 0.005
Accuracy 0.8561 0.0044
Sensitivity 0.8869 0.0101
Specificity 0.8223 0.0108
BEDROC 0.9628 0.0119
MCC Threshold 0.406 N/A
MCC 0.7229 N/A
F-score Threshold 0.406 N/A
F-score 0.8735 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:36