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P31645

Sodium-dependent serotonin transporter


Function

Serotonin transporter whose primary function in the central nervous system involves the regulation of serotonergic signaling via transport of serotonin molecules from the synaptic cleft back into the pre-synaptic terminal for re-utilization. Plays a key role in mediating regulation of the availability of serotonin to other receptors of serotonergic systems. Terminates the action of serotonin and recycles it in a sodium-dependent manner.


Database Links

Database Links
UniProt P31645
PDB Not available
BioGrid 112423
BindingDB P31645
DrugBank DB04836, DB00321, DB00543, DB00215, DB01242, DB00907, DB01151, DB01191, DB00514, DB01142, DB00476, DB01175, DB00472, DB00176, DB00458, DB00422, DB04896, DB00805, DB01149, DB00540, DB00715, DB00191, DB00344, DB01104, DB01105, DB01079, DB00193, DB00656, DB00726, DB00285, DB04832
Guide to PHARMACOLOGY 928
PharmGKB PA312
KEGG hsa:6532
BioCyc Not available
Entrez Gene (GeneID) 6532

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9555 9.3943 × 10-4
Accuracy 0.9129 0.0021
Sensitivity 0.9269 0.0025
Specificity 0.8976 0.0028
BEDROC 0.9568 0.0038
MCC Threshold 0.428 N/A
MCC 0.8315 N/A
F-score Threshold 0.428 N/A
F-score 0.9216 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:34