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P30530

Tyrosine-protein kinase receptor UFO


Function

Receptor tyrosine kinase that transduces signals from the extracellular matrix into the cytoplasm by binding growth factor GAS6 and which is thus regulating many physiological processes including cell survival, cell proliferation, migration and differentiation. Ligand binding at the cell surface induces dimerization and autophosphorylation of AXL. Following activation by ligand, ALX binds and induces tyrosine phosphorylation of PI3- kinase subunits PIK3R1, PIK3R2 and PIK3R3; but also GRB2, PLCG1, LCK and PTPN11. Other downstream substrate candidates for AXL are CBL, NCK2, SOCS1 and TENC1. Recruitment of GRB2 and phosphatidylinositol 3 kinase regulatory subunits by AXL leads to the downstream activation of the AKT kinase. GAS6/AXL signaling plays a role in various processes such as endothelial cell survival during acidification by preventing apoptosis, optimal cytokine signaling during human natural killer cell development, hepatic regeneration, gonadotropin-releasing hormone neuron survival and migration, platelet activation, or regulation of thrombotic responses. Plays also an important role in inhibition of Toll-like receptors (TLRs)-mediated innate immune response. In case of filovirus infection, seems to function as a cell entry factor.


Database Links

Database Links
UniProt P30530
PDB 2C5D
BioGrid 107036
BindingDB P30530
DrugBank Not available
Guide to PHARMACOLOGY 1835
PharmGKB PA25197
KEGG hsa:558
BioCyc Not available
Entrez Gene (GeneID) 558

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.8783 0.0096
Accuracy 0.8086 0.0119
Sensitivity 0.7415 0.0213
Specificity 0.8655 0.0109
BEDROC 0.9792 0.0104
MCC Threshold 0.548 N/A
MCC 0.6674 N/A
F-score Threshold 0.548 N/A
F-score 0.7982 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:32