TargetNet


P28702

Retinoic acid receptor RXR-beta


Function

Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. The RAR/RXR heterodimers bind to the retinoic acid response elements (RARE) composed of tandem 5'-AGGTCA-3' sites known as DR1-DR5 (By similarity). Specifically binds 9-cis retinoic acid (9C-RA).


Database Links

Database Links
UniProt P28702
PDB 1H9U, 1UHL
BioGrid 112169
BindingDB P28702
DrugBank DB00459, DB00210, DB00523, DB00307, DB00926, DB00799, DB00755
Guide to PHARMACOLOGY 611
PharmGKB PA34891
KEGG hsa:6257
BioCyc Not available
Entrez Gene (GeneID) 6257

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.986 0.0017
Accuracy 0.9575 0.0058
Sensitivity 0.9549 0.0106
Specificity 0.9598 0.0025
BEDROC 0.9885 0.0096
MCC Threshold 0.42 N/A
MCC 0.9333 N/A
F-score Threshold 0.42 N/A
F-score 0.9649 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:31