TargetNet


P28223

5-hydroxytryptamine receptor 2A


Function

G-protein coupled receptor for 5-hydroxytryptamine (serotonin). Also functions as a receptor for various drugs and psychoactive substances, including mescaline, psilocybin, 1-(2,5- dimethoxy-4-iodophenyl)-2-aminopropane (DOI) and lysergic acid diethylamide (LSD). Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors. Beta-arrestin family members inhibit signaling via G proteins and mediate activation of alternative signaling pathways. Signaling activates phospholipase C and a phosphatidylinositol-calcium second messenger system that modulates the activity of phosphatidylinositol 3-kinase and promotes the release of Ca(2+) ions from intracellular stores. Affects neural activity, perception, cognition and mood. Plays a role in the regulation of behavior, including responses to anxiogenic situations and psychoactive substances. Plays a role in intestinal smooth muscle contraction, and may play a role in arterial vasoconstriction.


Database Links

Database Links
UniProt P28223
PDB Not available
BioGrid 109588
BindingDB P28223
DrugBank DB01238, DB00477, DB01239, DB00604, DB01242, DB00363, DB00924, DB00434, DB00320, DB00843, DB00751, DB00696, DB00176, DB00933, DB00247, DB06148, DB00805, DB00370, DB01149, DB00334, DB01267, DB00715, DB00433, DB00420, DB01069, DB00777, DB01224, DB00734, DB06144, DB00372, DB00679, DB00752, DB00656, DB00285, DB00246
Guide to PHARMACOLOGY 6
PharmGKB PA193
KEGG hsa:3356
BioCyc Not available
Entrez Gene (GeneID) 3356

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9562 0.0011
Accuracy 0.9019 0.0026
Sensitivity 0.8858 0.0041
Specificity 0.9154 0.0028
BEDROC 0.9613 0.0054
MCC Threshold 0.404 N/A
MCC 0.8007 N/A
F-score Threshold 0.404 N/A
F-score 0.894 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:31