TargetNet


P28222

5-hydroxytryptamine receptor 1B


Function

G-protein coupled receptor for 5-hydroxytryptamine (serotonin). Also functions as a receptor for ergot alkaloid derivatives, various anxiolytic and antidepressant drugs and other psychoactive substances, such as lysergic acid diethylamide (LSD). Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors, such as adenylate cyclase. Signaling inhibits adenylate cyclase activity. Arrestin family members inhibit signaling via G proteins and mediate activation of alternative signaling pathways. Regulates the release of 5-hydroxytryptamine, dopamine and acetylcholine in the brain, and thereby affects neural activity, nociceptive processing, pain perception, mood and behavior. Besides, plays a role in vasoconstriction of cerebral arteries.


Database Links

Database Links
UniProt P28222
PDB 2G1X, 4IAQ, 4IAR
BioGrid 109583
BindingDB P28222
DrugBank DB00918, DB01191, DB00320, DB00216, DB00696, DB00998, DB00952, DB00960, DB00571, DB00953, DB00669, DB00285, DB00315
Guide to PHARMACOLOGY 2
PharmGKB PA29549
KEGG hsa:3351
BioCyc Not available
Entrez Gene (GeneID) 3351

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9733 0.0011
Accuracy 0.9315 0.0018
Sensitivity 0.9037 0.0034
Specificity 0.9572 0.0031
BEDROC 0.993 0.0035
MCC Threshold 0.444 N/A
MCC 0.8703 N/A
F-score Threshold 0.444 N/A
F-score 0.9318 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:31