TargetNet


P28221

5-hydroxytryptamine receptor 1D


Function

G-protein coupled receptor for 5-hydroxytryptamine (serotonin). Also functions as a receptor for ergot alkaloid derivatives, various anxiolytic and antidepressant drugs and other psychoactive substances. Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors, such as adenylate cyclase. Signaling inhibits adenylate cyclase activity. Regulates the release of 5-hydroxytryptamine in the brain, and thereby affects neural activity. May also play a role in regulating the release of other neurotransmitters. May play a role in vasoconstriction.


Database Links

Database Links
UniProt P28221
PDB Not available
BioGrid 109584
BindingDB P28221
DrugBank DB00918, DB00320, DB00216, DB00696, DB00998, DB00952, DB00953, DB00669, DB01079, DB00246, DB00315
Guide to PHARMACOLOGY 3
PharmGKB PA29550
KEGG hsa:3352
BioCyc Not available
Entrez Gene (GeneID) 3352

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9822 0.0013
Accuracy 0.9403 0.0026
Sensitivity 0.917 0.0051
Specificity 0.9626 0.0035
BEDROC 0.9992 3.4784 × 10-4
MCC Threshold 0.432 N/A
MCC 0.8883 N/A
F-score Threshold 0.432 N/A
F-score 0.9425 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:31