TargetNet


P14842

5-hydroxytryptamine receptor 2A


Function

G-protein coupled receptor for 5-hydroxytryptamine (serotonin). Also functions as a receptor for various drugs and psychoactive substances, including mescaline, psilocybin, 1-(2,5- dimethoxy-4-iodophenyl)-2-aminopropane (DOI) and lysergic acid diethylamide (LSD). Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors. Beta-arrestin family members inhibit signaling via G proteins and mediate activation of alternative signaling pathways. Signaling activates phospholipase C and a phosphatidylinositol-calcium second messenger system that modulates the activity of phosphatidylinositol 3-kinase and promotes the release of Ca(2+) ions from intracellular stores. Affects neural activity, perception, cognition and mood. Plays a role in the regulation of behavior, including responses to anxiogenic situations and psychoactive substances. Plays a role in intestinal smooth muscle contraction, and may play a role in arterial vasoconstriction.


Database Links

Database Links
UniProt P14842
PDB 4OAJ
BioGrid 248227
BindingDB P14842
DrugBank Not available
Guide to PHARMACOLOGY 6
PharmGKB Not available
KEGG rno:29595
BioCyc Not available
Entrez Gene (GeneID) 29595

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9635 0.0015
Accuracy 0.9169 0.0025
Sensitivity 0.9327 0.004
Specificity 0.9009 0.0044
BEDROC 0.9744 0.0038
MCC Threshold 0.496 N/A
MCC 0.8307 N/A
F-score Threshold 0.496 N/A
F-score 0.9173 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:25