TargetNet


P14780

Matrix metalloproteinase-9


Function

May play an essential role in local proteolysis of the extracellular matrix and in leukocyte migration. Could play a role in bone osteoclastic resorption. Cleaves KiSS1 at a Gly-|-Leu bond. Cleaves type IV and type V collagen into large C-terminal three quarter fragments and shorter N-terminal one quarter fragments. Degrades fibronectin but not laminin or Pz-peptide.


Database Links

Database Links
UniProt P14780
PDB 1GKC, 1GKD, 1ITV, 1L6J, 1LKG, 2OVX, 2OVZ, 2OW0, 2OW1, 2OW2, 4H1Q, 4H2E, 4H3X, 4H82, 4HMA
BioGrid 110461
BindingDB P14780
DrugBank DB01296, DB00786, DB01017, DB00641
Guide to PHARMACOLOGY 1633
PharmGKB PA30889
KEGG hsa:4318
BioCyc Not available
Entrez Gene (GeneID) 4318

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9825 9.0758 × 10-4
Accuracy 0.9564 0.002
Sensitivity 0.956 0.0038
Specificity 0.9568 0.002
BEDROC 0.9933 0.004
MCC Threshold 0.51 N/A
MCC 0.9183 N/A
F-score Threshold 0.504 N/A
F-score 0.9596 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:25