TargetNet


P11802

Cyclin-dependent kinase 4


Function

Ser/Thr-kinase component of cyclin D-CDK4 (DC) complexes that phosphorylate and inhibit members of the retinoblastoma (RB) protein family including RB1 and regulate the cell-cycle during G(1)/S transition. Phosphorylation of RB1 allows dissociation of the transcription factor E2F from the RB/E2F complexes and the subsequent transcription of E2F target genes which are responsible for the progression through the G(1) phase. Hypophosphorylates RB1 in early G(1) phase. Cyclin D-CDK4 complexes are major integrators of various mitogenenic and antimitogenic signals. Also phosphorylates SMAD3 in a cell-cycle-dependent manner and represses its transcriptional activity. Component of the ternary complex, cyclin D/CDK4/CDKN1B, required for nuclear translocation and activity of the cyclin D-CDK4 complex.


Database Links

Database Links
UniProt P11802
PDB 1LD2, 2W96, 2W99, 2W9F, 2W9Z, 3G33
BioGrid 107454
BindingDB P11802
DrugBank Not available
Guide to PHARMACOLOGY 1976
PharmGKB PA102
KEGG hsa:1019
BioCyc Not available
Entrez Gene (GeneID) 1019

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9614 0.0015
Accuracy 0.9103 0.0031
Sensitivity 0.9193 0.0065
Specificity 0.8998 0.0041
BEDROC 0.9976 0.0023
MCC Threshold 0.524 N/A
MCC 0.8204 N/A
F-score Threshold 0.414 N/A
F-score 0.9165 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:23