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P11712

Cytochrome P450 2C9


Function

Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. This enzyme contributes to the wide pharmacokinetics variability of the metabolism of drugs such as S- warfarin, diclofenac, phenytoin, tolbutamide and losartan.


Database Links

Database Links
UniProt P11712
PDB 1OG2, 1OG5, 1R9O
BioGrid 107937
BindingDB P11712
DrugBank DB01418, DB00969, DB01118, DB00025, DB00673, DB00559, DB00821, DB01136, DB00482, DB01242, DB00250, DB00705, DB00967, DB00304, DB00586, DB00736, DB00749, DB00196, DB00472, DB00712, DB01095, DB00176, DB00983, DB01241, DB01381, DB01016, DB00222, DB01067, DB01018, DB00327, DB01050, DB00458, DB01029, DB01026, DB00448, DB00678, DB01283, DB00470, DB00784, DB00814, DB00532, DB00916, DB01110, DB00683, DB00471, DB00731, DB00220, DB00622, DB01192, DB00213, DB00617, DB00946, DB00252, DB00175, DB00908, DB00503, DB00412, DB01104, DB00203, DB01015, DB00870, DB00675, DB00469, DB00342, DB01124, DB00214, DB01361, DB00580, DB00177, DB00582, DB00682, DB00549, DB00744
Guide to PHARMACOLOGY Not available
PharmGKB PA126
KEGG hsa:1559
BioCyc Not available
Entrez Gene (GeneID) 1559

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.835 0.0023
Accuracy 0.7497 0.0064
Sensitivity 0.7394 0.0118
Specificity 0.76 0.0087
BEDROC 0.9584 0.0074
MCC Threshold 0.562 N/A
MCC 0.5109 N/A
F-score Threshold 0.4 N/A
F-score 0.77 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:23