TargetNet


P08908

5-hydroxytryptamine receptor 1A


Function

G-protein coupled receptor for 5-hydroxytryptamine (serotonin). Also functions as a receptor for various drugs and psychoactive substances. Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors, such as adenylate cyclase. Beta-arrestin family members inhibit signaling via G proteins and mediate activation of alternative signaling pathways. Signaling inhibits adenylate cyclase activity and activates a phosphatidylinositol-calcium second messenger system that regulates the release of Ca(2+) ions from intracellular stores. Plays a role in the regulation of 5- hydroxytryptamine release and in the regulation of dopamine and 5- hydroxytryptamine metabolism. Plays a role in the regulation of dopamine and 5-hydroxytryptamine levels in the brain, and thereby affects neural activity, mood and behavior. Plays a role in the response to anxiogenic stimuli.


Database Links

Database Links
UniProt P08908
PDB Not available
BioGrid 109582
BindingDB P08908
DrugBank DB00866, DB01238, DB00490, DB00363, DB00216, DB01049, DB00176, DB00589, DB00247, DB00370, DB00960, DB00571, DB01224, DB01104, DB01079, DB00656, DB00285, DB00246
Guide to PHARMACOLOGY 1
PharmGKB PA192
KEGG hsa:3350
BioCyc Not available
Entrez Gene (GeneID) 3350

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9661 7.3953 × 10-4
Accuracy 0.9202 0.0019
Sensitivity 0.9138 0.0033
Specificity 0.9261 0.0016
BEDROC 0.9743 0.0025
MCC Threshold 0.528 N/A
MCC 0.8374 N/A
F-score Threshold 0.43 N/A
F-score 0.9168 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:22