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P05177

Cytochrome P450 1A2


Function

Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. Most active in catalyzing 2-hydroxylation. Caffeine is metabolized primarily by cytochrome CYP1A2 in the liver through an initial N3-demethylation. Also acts in the metabolism of aflatoxin B1 and acetaminophen. Participates in the bioactivation of carcinogenic aromatic and heterocyclic amines. Catalizes the N-hydroxylation of heterocyclic amines and the O- deethylation of phenacetin.


Database Links

Database Links
UniProt P05177
PDB 2HI4
BioGrid 107924
BindingDB P05177
DrugBank DB01418, DB00316, DB00787, DB00969, DB01424, DB00321, DB00261, DB00972, DB00188, DB00201, DB00262, DB00475, DB00477, DB00356, DB00501, DB01012, DB00537, DB01242, DB00257, DB00363, DB00286, DB00924, DB00851, DB00967, DB00829, DB00527, DB00586, DB00476, DB00467, DB00736, DB00783, DB00655, DB00544, DB00499, DB00176, DB00998, DB00365, DB00502, DB01094, DB00458, DB01026, DB01097, DB01002, DB01137, DB00281, DB00978, DB01065, DB00532, DB00379, DB00370, DB01059, DB00540, DB01165, DB00334, DB00904, DB00377, DB00213, DB00487, DB01100, DB01182, DB00571, DB00908, DB00980, DB00863, DB01367, DB01045, DB00740, DB00533, DB00268, DB00296, DB00382, DB00976, DB00342, DB00277, DB00730, DB00697, DB01124, DB00661, DB00682, DB00744, DB00315
Guide to PHARMACOLOGY Not available
PharmGKB PA27093
KEGG hsa:1544
BioCyc MetaCyc:HS06728-MONOMER
Entrez Gene (GeneID) 1544

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.8367 0.0065
Accuracy 0.7672 0.0075
Sensitivity 0.7283 0.0116
Specificity 0.8029 0.0145
BEDROC 0.9157 0.0148
MCC Threshold 0.458 N/A
MCC 0.5548 N/A
F-score Threshold 0.458 N/A
F-score 0.7714 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:19