TargetNet


P04626

Receptor tyrosine-protein kinase erbB-2


Function

Protein tyrosine kinase that is part of several cell surface receptor complexes, but that apparently needs a coreceptor for ligand binding. Essential component of a neuregulin-receptor complex, although neuregulins do not interact with it alone. GP30 is a potential ligand for this receptor. Regulates outgrowth and stabilization of peripheral microtubules (MTs). Upon ERBB2 activation, the MEMO1-RHOA-DIAPH1 signaling pathway elicits the phosphorylation and thus the inhibition of GSK3B at cell membrane. This prevents the phosphorylation of APC and CLASP2, allowing its association with the cell membrane. In turn, membrane-bound APC allows the localization of MACF1 to the cell membrane, which is required for microtubule capture and stabilization.


Database Links

Database Links
UniProt P04626
PDB 1MFG, 1MFL, 1MW4, 1N8Z, 1OVC, 1QR1, 1S78, 2A91, 2JWA, 2KS1, 2L4K, 3BE1, 3H3B, 3MZW, 3N85, 3PP0, 3RCD, 4GFU, 4HRL, 4HRM, 4HRN
BioGrid 108376
BindingDB P04626
DrugBank DB01259, DB01006, DB00072
Guide to PHARMACOLOGY 2019
PharmGKB PA27844
KEGG hsa:2064
BioCyc Not available
Entrez Gene (GeneID) 2064

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9647 0.0024
Accuracy 0.9065 0.0027
Sensitivity 0.9008 0.0055
Specificity 0.9125 0.004
BEDROC 0.9975 0.0012
MCC Threshold 0.306 N/A
MCC 0.8202 N/A
F-score Threshold 0.306 N/A
F-score 0.915 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:18