RAF proto-oncogene serine/threonine-protein kinase
Serine/threonine-protein kinase that acts as a regulatory link between the membrane-associated Ras GTPases and the MAPK/ERK cascade, and this critical regulatory link functions as a switch determining cell fate decisions including proliferation, differentiation, apoptosis, survival and oncogenic transformation. RAF1 activation initiates a mitogen-activated protein kinase (MAPK) cascade that comprises a sequential phosphorylation of the dual-specific MAPK kinases (MAP2K1/MEK1 and MAP2K2/MEK2) and the extracellular signal-regulated kinases (MAPK3/ERK1 and MAPK1/ERK2). The phosphorylated form of RAF1 (on residues Ser-338 and Ser-339, by PAK1) phosphorylates BAD/Bcl2- antagonist of cell death at 'Ser-75'. Phosphorylates adenylyl cyclases: ADCY2, ADCY5 and ADCY6, resulting in their activation. Phosphorylates PPP1R12A resulting in inhibition of the phosphatase activity. Phosphorylates TNNT2/cardiac muscle troponin T. Can promote NF-kB activation and inhibit signal transducers involved in motility (ROCK2), apoptosis (MAP3K5/ASK1 and STK3/MST2), proliferation and angiogenesis (RB1). Can protect cells from apoptosis also by translocating to the mitochondria where it binds BCL2 and displaces BAD/Bcl2-antagonist of cell death. Regulates Rho signaling and migration, and is required for normal wound healing. Plays a role in the oncogenic transformation of epithelial cells via repression of the TJ protein, occludin (OCLN) by inducing the up-regulation of a transcriptional repressor SNAI2/SLUG, which induces down-regulation of OCLN. Restricts caspase activation in response to selected stimuli, notably Fas stimulation, pathogen-mediated macrophage apoptosis, and erythroid differentiation.
| Database | Links |
|---|---|
| UniProt | P04049 |
| PDB | 1C1Y, 1FAQ, 1FAR, 1GUA, 1RFA, 3CU8, 3IQJ, 3IQU, 3IQV, 3KUC, 3KUD, 3NKX, 3O8I, 3OMV, 4FJ3, 4G0N, 4G3X, 4IEA, 4IHL |
| BioGrid | 111831 |
| BindingDB | P04049 |
| DrugBank | DB00398 |
| Guide to PHARMACOLOGY | 2184 |
| PharmGKB | PA34183 |
| KEGG | hsa:5894 |
| BioCyc | Not available |
| Entrez Gene (GeneID) | 5894 |
| Metric | Mean Value | Standard Deviation |
|---|---|---|
| AUC | 0.9509 | 0.0026 |
| Accuracy | 0.8857 | 0.0044 |
| Sensitivity | 0.8435 | 0.0094 |
| Specificity | 0.9255 | 0.0065 |
| BEDROC | 0.9956 | 0.0015 |
| MCC Threshold | 0.414 | N/A |
| MCC | 0.7736 | N/A |
| F-score Threshold | 0.414 | N/A |
| F-score | 0.8825 | N/A |