TargetNet


P03956

Interstitial collagenase


Function

Cleaves collagens of types I, II, and III at one site in the helical domain. Also cleaves collagens of types VII and X. In case of HIV infection, interacts and cleaves the secreted viral Tat protein, leading to a decrease in neuronal Tat's mediated neurotoxicity.


Database Links

Database Links
UniProt P03956
PDB 1AYK, 1CGE, 1CGF, 1CGL, 1HFC, 1SU3, 2AYK, 2CLT, 2J0T, 2TCL, 3AYK, 3SHI, 4AUO, 4AYK, 966C
BioGrid 110456
BindingDB P03956
DrugBank Not available
Guide to PHARMACOLOGY 1628
PharmGKB PA30867
KEGG hsa:4312
BioCyc Not available
Entrez Gene (GeneID) 4312

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9701 9.1747 × 10-4
Accuracy 0.9235 0.0029
Sensitivity 0.9284 0.0042
Specificity 0.9188 0.004
BEDROC 0.9838 0.0041
MCC Threshold 0.44 N/A
MCC 0.8565 N/A
F-score Threshold 0.44 N/A
F-score 0.9276 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


Copyright © 2014 - 2017 TargetNet. Developed and maintained by Nan Xiao.

Page generated on: 2014-04-29 14:39:18