TargetNet


P00735

Prothrombin


Function

Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing (By similarity).


Database Links

Database Links
UniProt P00735
PDB 1A0H, 1AVG, 1BBR, 1ETR, 1ETS, 1ETT, 1HRT, 1ID5, 1MKW, 1MKX, 1NL1, 1NL2, 1TBQ, 1TBR, 1TOC, 1UCY, 1UVT, 1UVU, 1VIT, 1YCP, 2A1D, 2HPP, 2ODY, 2PF1, 2PF2, 2SPT, 3PMA, 3PMB
BioGrid Not available
BindingDB P00735
DrugBank Not available
Guide to PHARMACOLOGY Not available
PharmGKB Not available
KEGG bta:280685
BioCyc Not available
Entrez Gene (GeneID) 280685

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9166 0.0073
Accuracy 0.8863 0.0068
Sensitivity 0.8261 0.0096
Specificity 0.9427 0.0087
BEDROC 0.9956 0.0014
MCC Threshold 0.378 N/A
MCC 0.7994 N/A
F-score Threshold 0.378 N/A
F-score 0.8929 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:17