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P00517

cAMP-dependent protein kinase catalytic subunit alpha


Function

Phosphorylates a large number of substrates in the cytoplasm and the nucleus. Regulates the abundance of compartmentalized pools of its regulatory subunits through phosphorylation of PJA2 which binds and ubiquitinates these subunits, leading to their subsequent proteolysis. Phosphorylates CDC25B, ABL1, NFKB1, CLDN3, PSMC5/RPT6, PJA2, RYR2, RORA and VASP. RORA is activated by phosphorylation. Required for glucose- mediated adipogenic differentiation increase and osteogenic differentiation inhibition from osteoblasts. Involved in the regulation of platelets in response to thrombin and collagen; maintains circulating platelets in a resting state by phosphorylating proteins in numerous platelet inhibitory pathways when in complex with NF-kappa-B (NFKB1 and NFKB2) and I-kappa-B- alpha (NFKBIA), but thrombin and collagen disrupt these complexes and free active PRKACA stimulates platelets and leads to platelet aggregation by phosphorylating VASP. Prevents the antiproliferative and anti-invasive effects of alpha- difluoromethylornithine in breast cancer cells when activated. RYR2 channel activity is potentiated by phosphorylation in presence of luminal Ca(2+), leading to reduced amplitude and increased frequency of store overload-induced Ca(2+) release (SOICR) characterized by an increased rate of Ca(2+) release and propagation velocity of spontaneous Ca(2+) waves, despite reduced wave amplitude and resting cytosolic Ca(2+). PSMC5/RPT6 activation by phosphorylation stimulates proteasome. Negatively regulates tight junctions (TJs) in ovarian cancer cells via CLDN3 phosphorylation. NFKB1 phosphorylation promotes NF-kappa-B p50-p50 DNA binding. Involved in embryonic development by down-regulating the Hedgehog (Hh) signaling pathway that determines embryo pattern formation and morphogenesis. Prevents meiosis resumption in prophase-arrested oocytes via CDC25B inactivation by phosphorylation. May also regulate rapid eye movement (REM) sleep in the pedunculopontine tegmental (PPT) (By similarity). Phosphorylates APOBEC3G and AICDA (By similarity).


Database Links

Database Links
UniProt P00517
PDB 1KMU, 1KMW, 1Q24, 1Q61, 1Q62, 1Q8T, 1Q8U, 1Q8W, 1SMH, 1STC, 1SVE, 1SVG, 1SVH, 1SZM, 1VEB, 1XH4, 1XH5, 1XH6, 1XH7, 1XH8, 1XH9, 1XHA, 1YDR, 1YDS, 1YDT, 2C1A, 2C1B, 2F7E, 2F7X, 2F7Z, 2GFC, 2GNF, 2GNG, 2GNH, 2GNI, 2GNJ, 2GNL, 2JDS, 2JDT, 2JDV, 2OH0, 2OJF, 2UVX, 2UVY, 2UVZ, 2UW0, 2UW3, 2UW4, 2UW5, 2UW6, 2UW7, 2UW8, 2UZT, 2UZU, 2UZV, 2UZW, 2VNW, 2VNY, 2VO0, 2VO3, 2VO6, 2VO7, 3AG9, 3BWJ, 3DND, 3DNE, 3E8C, 3E8E, 3KKV, 3ZO1, 3ZO2, 3ZO3, 3ZO4, 4AXA, 4C33, 4C34, 4C35, 4C36, 4C37, 4C38, 4IE9, 4IJ9
BioGrid 159584
BindingDB P00517
DrugBank Not available
Guide to PHARMACOLOGY Not available
PharmGKB Not available
KEGG bta:282322
BioCyc Not available
Entrez Gene (GeneID) 282322

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.8599 0.0104
Accuracy 0.7755 0.0116
Sensitivity 0.797 0.0148
Specificity 0.7493 0.0244
BEDROC 0.973 0.0147
MCC Threshold 0.744 N/A
MCC 0.5832 N/A
F-score Threshold 0.554 N/A
F-score 0.8062 N/A

Downloads

R Model Object

Random Forest model object (.RData)

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Positive Set

SMILES string + affinity value (.tsv)

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Page generated on: 2014-04-29 14:39:17