TargetNet


O95180

Voltage-dependent T-type calcium channel subunit alpha-1H


Function

Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1H gives rise to T-type calcium currents. T-type calcium channels belong to the “low-voltage activated (LVA)” group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite negative potentials, and a voltage-dependent inactivation. T-type channels serve pacemaking functions in both central neurons and cardiac nodal cells and support calcium signaling in secretory cells and vascular smooth muscle. They may also be involved in the modulation of firing patterns of neurons which is important for information processing as well as in cell growth processes.


Database Links

Database Links
UniProt O95180
PDB Not available
BioGrid 114426
BindingDB O95180
DrugBank DB04841, DB01388
Guide to PHARMACOLOGY 536
PharmGKB PA380
KEGG hsa:8912
BioCyc Not available
Entrez Gene (GeneID) 8912

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.8984 0.0029
Accuracy 0.8299 0.0022
Sensitivity 0.8362 0.0043
Specificity 0.8235 0.0028
BEDROC 0.9205 0.0063
MCC Threshold 0.498 N/A
MCC 0.6607 N/A
F-score Threshold 0.418 N/A
F-score 0.8368 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


Copyright © 2014 - 2017 TargetNet. Developed and maintained by Nan Xiao.

Page generated on: 2014-04-29 14:39:16