TargetNet


O43497

Voltage-dependent T-type calcium channel subunit alpha-1G


Function

Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1G gives rise to T-type calcium currents. T-type calcium channels belong to the “low-voltage activated (LVA)” group and are strongly blocked by mibefradil. A particularity of this type of channel is an opening at quite negative potentials and a voltage-dependent inactivation. T-type channels serve pacemaking functions in both central neurons and cardiac nodal cells and support calcium signaling in secretory cells and vascular smooth muscle. They may also be involved in the modulation of firing patterns of neurons which is important for information processing as well as in cell growth processes.


Database Links

Database Links
UniProt O43497
PDB Not available
BioGrid 114427
BindingDB O43497
DrugBank DB00593, DB04841, DB01202, DB01388, DB01100, DB00347, DB00661, DB00909
Guide to PHARMACOLOGY 535
PharmGKB PA381
KEGG hsa:8913
BioCyc Not available
Entrez Gene (GeneID) 8913

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9491 0.0032
Accuracy 0.9079 0.0073
Sensitivity 0.9522 0.0131
Specificity 0.8575 0.0075
BEDROC 0.9574 0.0242
MCC Threshold 0.49 N/A
MCC 0.8432 N/A
F-score Threshold 0.49 N/A
F-score 0.9286 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

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Page generated on: 2014-04-29 14:39:15