TargetNet


O43353

Receptor-interacting serine/threonine-protein kinase 2


Function

Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. Contributes to the tyrosine phosphorylation of the guanine exchange factor ARHGEF2 through Src tyrosine kinase leading to NF-kappaB activation by NOD2. Once recruited, RIPK2 autophosphorylates and undergoes 'Lys-63'-linked polyubiquitination by E3 ubiquitin ligases XIAP, BIRC2 and BIRC3. The polyubiquitinated protein mediates the recruitment of MAP3K7/TAK1 to IKBKG/NEMO and induces 'Lys-63'-linked polyubiquitination of IKBKG/NEMO and subsequent activation of IKBKB/IKKB. In turn, NF-kappa-B is released from NF-kappa-B inhibitors and translocates into the nucleus where it activates the transcription of hundreds of genes involved in immune response, growth control, or protection against apoptosis. Plays also a role during engagement of the T-cell receptor (TCR) in promoting BCL10 phosphorylation and subsequent NF-kappa-B activation.


Database Links

Database Links
UniProt O43353
PDB 4C8B
BioGrid 114300
BindingDB O43353
DrugBank Not available
Guide to PHARMACOLOGY 2190
PharmGKB PA34395
KEGG hsa:8767
BioCyc Not available
Entrez Gene (GeneID) 8767

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.8385 0.0086
Accuracy 0.768 0.0101
Sensitivity 0.7752 0.0207
Specificity 0.7597 0.0133
BEDROC 0.8837 0.0131
MCC Threshold 0.478 N/A
MCC 0.5459 N/A
F-score Threshold 0.442 N/A
F-score 0.7992 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


Copyright © 2014 - 2017 TargetNet. Developed and maintained by Nan Xiao.

Page generated on: 2014-04-29 14:39:15