TargetNet


O15379

Histone deacetylase 3


Function

Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Participates in the BCL6 transcriptional repressor activity by deacetylating the H3 'Lys- 27' (H3K27) on enhancer elements, antagonizing EP300 acetyltransferase activity and repressing proximal gene expression. Probably participates in the regulation of transcription through its binding to the zinc-finger transcription factor YY1; increases YY1 repression activity. Required to repress transcription of the POU1F1 transcription factor. Acts as a molecular chaperone for shuttling phosphorylated NR2C1 to PML bodies for sumoylation.


Database Links

Database Links
UniProt O15379
PDB 4A69
BioGrid 114368
BindingDB O15379
DrugBank DB02546
Guide to PHARMACOLOGY 2617
PharmGKB PA29228
KEGG hsa:8841
BioCyc Not available
Entrez Gene (GeneID) 8841

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9168 0.0074
Accuracy 0.8613 0.0095
Sensitivity 0.8404 0.0143
Specificity 0.8805 0.0121
BEDROC 0.9939 0.0011
MCC Threshold 0.51 N/A
MCC 0.7521 N/A
F-score Threshold 0.464 N/A
F-score 0.8696 N/A

Downloads

R Model Object

Random Forest model object (.RData)

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Positive Set

SMILES string + affinity value (.tsv)

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Page generated on: 2014-04-29 14:39:14