TargetNet


O14920

Inhibitor of nuclear factor kappa-B kinase subunit beta


Function

Serine kinase that plays an essential role in the NF- kappa-B signaling pathway which is activated by multiple stimuli such as inflammatory cytokines, bacterial or viral products, DNA damages or other cellular stresses. Acts as part of the canonical IKK complex in the conventional pathway of NF-kappa-B activation and phosphorylates inhibitors of NF-kappa-B on 2 critical serine residues. These modifications allow polyubiquitination of the inhibitors and subsequent degradation by the proteasome. In turn, free NF-kappa-B is translocated into the nucleus and activates the transcription of hundreds of genes involved in immune response, growth control, or protection against apoptosis. In addition to the NF-kappa-B inhibitors, phosphorylates several other components of the signaling pathway including NEMO/IKBKG, NF-kappa-B subunits RELA and NFKB1, as well as IKK-related kinases TBK1 and IKBKE. IKK-related kinase phosphorylations may prevent the overproduction of inflammatory mediators since they exert a negative regulation on canonical IKKs. Also phosphorylates other substrates including NCOA3, BCL10 and IRS1. Within the nucleus, acts as an adapter protein for NFKBIA degradation in UV-induced NF-kappa-B activation.


Database Links

Database Links
UniProt O14920
PDB 3BRT, 3BRV, 4E3C, 4KIK
BioGrid 109767
BindingDB O14920
DrugBank DB01169, DB00995
Guide to PHARMACOLOGY 2039
PharmGKB PA29776
KEGG hsa:3551
BioCyc Not available
Entrez Gene (GeneID) 3551

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9526 0.002
Accuracy 0.8941 0.0022
Sensitivity 0.9028 0.0032
Specificity 0.8843 0.0023
BEDROC 0.9974 6.1013 × 10-4
MCC Threshold 0.566 N/A
MCC 0.8006 N/A
F-score Threshold 0.536 N/A
F-score 0.9043 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

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Page generated on: 2014-04-29 14:39:14