TargetNet


O00408

cGMP-dependent 3',5'-cyclic phosphodiesterase


Function

Cyclic nucleotide phosphodiesterase with a dual- specificity for the second messengers cAMP and cGMP, which are key regulators of many important physiological processes.


Database Links

Database Links
UniProt O00408
PDB 1Z1L, 3IBJ, 3ITM, 3ITU, 4HTX, 4HTZ, 4JIB
BioGrid 111164
BindingDB O00408
DrugBank DB00203, DB00605
Guide to PHARMACOLOGY 1297
PharmGKB PA33125
KEGG hsa:5138
BioCyc Not available
Entrez Gene (GeneID) 5138

Chemical Space of the Positive Compounds


Model Performance Metrics

Metric Mean Value Standard Deviation
AUC 0.9745 0.0025
Accuracy 0.9242 0.0076
Sensitivity 0.8902 0.0147
Specificity 0.9622 0.0178
BEDROC 0.9999 8.2719 × 10-6
MCC Threshold 0.582 N/A
MCC 0.8417 N/A
F-score Threshold 0.474 N/A
F-score 0.9176 N/A

Downloads

R Model Object

Random Forest model object (.RData)

Download RData

Positive Set

SMILES string + affinity value (.tsv)

Download TSV


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Page generated on: 2014-04-29 14:39:13