Print Fitted Ensemble Sparse Partial Least Squares Object
Source:R/print.enspls.R
print.enspls.fit.RdPrint coefficients of each model in the enspls.fit object.
Usage
# S3 method for enspls.fit
print(x, ...)Arguments
- x
An object of class
enspls.fit.- ...
Additional parameters for
print.
See also
See enspls.fit for fitting ensemble sparse
partial least squares regression models.
Author
Nan Xiao <https://nanx.me>
Examples
data("logd1k")
x <- logd1k$x
y <- logd1k$y
set.seed(42)
fit <- enspls.fit(
x, y,
reptimes = 5, maxcomp = 3,
alpha = c(0.3, 0.6, 0.9)
)
print(fit)
#> Coefficients of the Models by Ensemble Sparse Partial Least Squares
#> ---
#> [,1] [,2] [,3] [,4]
#> BalabanJ -0.043615048 -0.070476160 -0.061234111 -0.0641194287
#> BertzCT -0.010797407 -0.010380918 -0.014190111 -0.0198473677
#> Chi0 0.034719388 0.031396910 0.031244743 0.0305194922
#> Chi0n 0.053961369 0.051389288 0.054495519 0.0524801055
#> Chi0v 0.053701577 0.051940514 0.053866466 0.0534589673
#> Chi1 0.051776232 0.049156542 0.049348357 0.0492213616
#> Chi1n 0.070459184 0.069096237 0.072714905 0.0727060040
#> Chi1v 0.044723121 0.043485995 0.047373453 0.0501593866
#> Chi2n 0.044969369 0.049246878 0.053608909 0.0505554796
#> Chi2v -0.007655968 -0.004618584 -0.001476135 0.0001540116
#> Chi3n 0.032584667 0.042587170 0.046107374 0.0415386369
#> Chi3v -0.028277116 -0.022984653 -0.021257238 -0.0203092032
#> Chi4n 0.025069486 0.035056020 0.037250699 0.0377062265
#> Chi4v -0.032725942 -0.028311655 -0.028345799 -0.0254204075
#> EState_VSA1 -0.145952322 -0.151990047 -0.160770607 -0.1525700022
#> EState_VSA10 -0.156900443 -0.168802906 -0.175239253 -0.1722320471
#> EState_VSA11 -0.127792171 -0.135963476 -0.143448807 -0.1529079518
#> EState_VSA2 -0.088764258 -0.081331379 -0.090132085 -0.0733057615
#> EState_VSA3 0.056790068 0.028421271 0.053648385 0.0386607294
#> EState_VSA4 0.063669587 0.074797750 0.074053361 0.0699041874
#> EState_VSA5 0.076840942 0.113331436 0.116703240 0.1013286787
#> EState_VSA6 -0.039520870 -0.054418432 -0.060441879 -0.0391363977
#> EState_VSA7 0.167588096 0.158416601 0.168272101 0.1618998057
#> EState_VSA8 0.009235939 0.004258386 -0.006701922 -0.0011150675
#> EState_VSA9 0.160639733 0.170068653 0.176254590 0.1714440988
#> ExactMolWt 0.050748220 0.048487236 0.047997890 0.0454753788
#> FractionCSP3 -0.002537413 0.016775756 0.014177552 0.0000000000
#> HallKierAlpha 0.019451372 0.000000000 0.000000000 0.0329693176
#> HeavyAtomCount 0.041665347 0.039779625 0.039215273 0.0389117918
#> HeavyAtomMolWt 0.049142955 0.047099309 0.045859934 0.0431088851
#> Ipc 0.057240507 0.060688810 0.069024848 0.0694421064
#> Kappa1 0.038204987 0.032402483 0.032511070 0.0348008587
#> Kappa2 0.073454618 0.061351458 0.062538464 0.0699833246
#> Kappa3 0.068769152 0.053787212 0.048842217 0.0663792137
#> LabuteASA 0.050468473 0.048957140 0.047963605 0.0492392904
#> MaxAbsEStateIndex -0.058201076 -0.046954270 -0.035764073 -0.0459235492
#> MaxEStateIndex -0.058201076 -0.046954270 -0.035764073 -0.0459235492
#> MinAbsEStateIndex 0.050724276 0.044527421 0.044215313 0.0353840523
#> MinEStateIndex 0.080735399 0.074187812 0.072888633 0.0724654251
#> MolMR 0.064441013 0.060992387 0.061907090 0.0617893424
#> MolWt 0.050700489 0.048453503 0.047956295 0.0454522770
#> NumValenceElectrons 0.041901095 0.039028411 0.040413395 0.0398859275
#> PEOE_VSA1 -0.123885717 -0.111986458 -0.128388290 -0.1335502496
#> PEOE_VSA10 0.060135647 0.072095820 0.042111810 0.0611046246
#> PEOE_VSA11 0.027518533 0.000000000 0.054256529 0.0593889088
#> PEOE_VSA12 -0.070409371 -0.085305819 -0.078339953 -0.0775848326
#> PEOE_VSA13 0.071124088 0.073838570 0.087264498 0.0780882742
#> PEOE_VSA14 -0.059283402 -0.052884362 -0.059018175 -0.0639531460
#> PEOE_VSA2 -0.135631007 -0.136699485 -0.158100226 -0.1453559333
#> PEOE_VSA3 -0.015399543 -0.030536558 -0.023616048 -0.0258053476
#> PEOE_VSA4 0.089159585 0.082572159 0.101865179 0.1083556038
#> PEOE_VSA5 0.000000000 0.000000000 0.000000000 0.0000000000
#> PEOE_VSA6 0.252455157 0.257218113 0.264862957 0.3016795122
#> PEOE_VSA7 0.131757300 0.126559513 0.126970928 0.1081498903
#> PEOE_VSA8 -0.251591255 -0.244659553 -0.247195649 -0.2892456024
#> PEOE_VSA9 0.093581834 0.074355909 0.075437882 0.0803304497
#> SMR_VSA1 -0.045809417 -0.040299095 -0.050701107 -0.0532047159
#> SMR_VSA10 0.025671513 0.036747988 0.020329048 0.0236814814
#> SMR_VSA2 0.000000000 0.000000000 0.000000000 0.0000000000
#> SMR_VSA3 -0.196156845 -0.207343129 -0.205718468 -0.1978050051
#> SMR_VSA4 0.086514311 0.092000949 0.090979644 0.1135589734
#> SMR_VSA5 0.144746921 0.144103173 0.158124866 0.1643202372
#> SMR_VSA6 -0.086355302 -0.087439103 -0.084443620 -0.0980728660
#> SMR_VSA7 0.021803034 0.011365422 -0.006054515 0.0030932243
#> SMR_VSA9 0.164334759 0.153864976 0.180528755 0.1579959854
#> SlogP_VSA1 -0.045042683 -0.031673412 -0.087011109 -0.0688301411
#> SlogP_VSA10 0.119767503 0.115394919 0.103222595 0.0843745870
#> SlogP_VSA11 0.114675123 0.110717941 0.114633271 0.0846142758
#> SlogP_VSA12 0.103280911 0.095740332 0.101496317 0.1105220578
#> SlogP_VSA2 -0.207711269 -0.202806412 -0.200423733 -0.2013781453
#> SlogP_VSA3 -0.153164458 -0.151392486 -0.134059624 -0.1516867090
#> SlogP_VSA4 0.080989430 0.078481646 0.076140508 0.0736978562
#> SlogP_VSA5 0.174022630 0.173399624 0.191735830 0.2059561988
#> SlogP_VSA6 0.136169116 0.133023697 0.110695001 0.1313060684
#> SlogP_VSA7 0.077780951 0.068859412 0.083787537 0.0846865586
#> SlogP_VSA8 0.000000000 0.000000000 0.067225424 0.0563976493
#> TPSA -0.220618737 -0.215277058 -0.233074352 -0.2170641606
#> VSA_EState10 0.093743521 0.084141143 0.095789368 0.1014189884
#> VSA_EState8 0.089001823 0.076620959 0.083263325 0.0777088146
#> VSA_EState9 -0.089786907 -0.081994686 -0.094262874 -0.0921319769
#> [,5]
#> BalabanJ -0.073894883
#> BertzCT -0.007687107
#> Chi0 0.032319300
#> Chi0n 0.052919408
#> Chi0v 0.056854869
#> Chi1 0.048305879
#> Chi1n 0.069904194
#> Chi1v 0.051215760
#> Chi2n 0.048557618
#> Chi2v 0.005050211
#> Chi3n 0.038590608
#> Chi3v -0.016430846
#> Chi4n 0.028264216
#> Chi4v -0.022830716
#> EState_VSA1 -0.151918402
#> EState_VSA10 -0.163913222
#> EState_VSA11 -0.114487283
#> EState_VSA2 -0.074990673
#> EState_VSA3 0.027238867
#> EState_VSA4 0.081673528
#> EState_VSA5 0.119173308
#> EState_VSA6 -0.062270377
#> EState_VSA7 0.169929249
#> EState_VSA8 -0.008508467
#> EState_VSA9 0.169614152
#> ExactMolWt 0.053132588
#> FractionCSP3 0.000000000
#> HallKierAlpha 0.000000000
#> HeavyAtomCount 0.039291679
#> HeavyAtomMolWt 0.051773716
#> Ipc 0.040666065
#> Kappa1 0.035993825
#> Kappa2 0.066238470
#> Kappa3 0.056805777
#> LabuteASA 0.050833015
#> MaxAbsEStateIndex -0.039681288
#> MaxEStateIndex -0.039681288
#> MinAbsEStateIndex 0.058219064
#> MinEStateIndex 0.090836706
#> MolMR 0.065637066
#> MolWt 0.053101413
#> NumValenceElectrons 0.038876330
#> PEOE_VSA1 -0.131939533
#> PEOE_VSA10 0.063132746
#> PEOE_VSA11 0.000000000
#> PEOE_VSA12 -0.064913191
#> PEOE_VSA13 0.062907184
#> PEOE_VSA14 -0.053503851
#> PEOE_VSA2 -0.123394883
#> PEOE_VSA3 -0.021138001
#> PEOE_VSA4 0.044285049
#> PEOE_VSA5 0.000000000
#> PEOE_VSA6 0.269371381
#> PEOE_VSA7 0.118261626
#> PEOE_VSA8 -0.241824460
#> PEOE_VSA9 0.084102621
#> SMR_VSA1 -0.042033373
#> SMR_VSA10 0.054396319
#> SMR_VSA2 0.000000000
#> SMR_VSA3 -0.223644660
#> SMR_VSA4 0.086073286
#> SMR_VSA5 0.152844318
#> SMR_VSA6 -0.100483543
#> SMR_VSA7 0.017135164
#> SMR_VSA9 0.142266776
#> SlogP_VSA1 -0.055774803
#> SlogP_VSA10 0.082997064
#> SlogP_VSA11 0.088648633
#> SlogP_VSA12 0.112241959
#> SlogP_VSA2 -0.204690587
#> SlogP_VSA3 -0.156349706
#> SlogP_VSA4 0.077452104
#> SlogP_VSA5 0.198178112
#> SlogP_VSA6 0.127587128
#> SlogP_VSA7 0.000000000
#> SlogP_VSA8 0.000000000
#> TPSA -0.214509241
#> VSA_EState10 0.084382079
#> VSA_EState8 0.077845374
#> VSA_EState9 -0.085217775